Cluster: HRGMv2_0060_CGC7
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0060
- CGC Family ID: CGCFAM_00922
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0060_8 | HRGMv2_0060_8_22 | 20349 | 21359 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_0060_8 | HRGMv2_0060_8_23 | 21391 | 22002 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0060_8 | HRGMv2_0060_8_24 | 22047 | 24599 | - | GH3 |
| pfam | HRGMv2_0060_8 | HRGMv2_0060_8_25 | 24638 | 25537 | + | S6PP | Hydrolase_3 |
| TC | HRGMv2_0060_8 | HRGMv2_0060_8_26 | 25534 | 26799 | + | 2.A.1.21.21 |
| TC | HRGMv2_0060_8 | HRGMv2_0060_8_27 | 26906 | 27136 | + | 4.A.1.1.1 |
| TC | HRGMv2_0060_8 | HRGMv2_0060_8_28 | 27133 | 27606 | + | 4.A.1.2.6 |
| CAZyme | HRGMv2_0060_8 | HRGMv2_0060_8_29 | 27680 | 29830 | - | GH77 |
| pfam | HRGMv2_0060_8 | HRGMv2_0060_8_30 | 29872 | 30156 | - | PTS_EIIB |
| TC | HRGMv2_0060_8 | HRGMv2_0060_8_31 | 30426 | 32108 | - | 3.A.1.120.6 |
| pfam | HRGMv2_0060_8 | HRGMv2_0060_8_32 | 32427 | 33311 | + | BPL_C | BPL_LplA_LipB | BPL_LplA_LipB_2 |
| sulfatase | HRGMv2_0060_8 | HRGMv2_0060_8_33 | 33298 | 35091 | + | S1_37 |
| TC | HRGMv2_0060_8 | HRGMv2_0060_8_34 | 35088 | 36644 | + | 3.B.1.1.5 |
Gene ID: HRGMv2_0060_8_22
Type: CAZyme
Location: 20349 - 21359 (-)
Type: CAZyme
Location: 20349 - 21359 (-)
Gene ID: HRGMv2_0060_8_23
Type:
Location: 21391 - 22002 (-)
Type:
Location: 21391 - 22002 (-)
Gene ID: HRGMv2_0060_8_24
Type: CAZyme
Location: 22047 - 24599 (-)
Type: CAZyme
Location: 22047 - 24599 (-)
Gene ID: HRGMv2_0060_8_25
Type: pfam
Location: 24638 - 25537 (+)
Type: pfam
Location: 24638 - 25537 (+)
Gene ID: HRGMv2_0060_8_26
Type: TC
Location: 25534 - 26799 (+)
Type: TC
Location: 25534 - 26799 (+)
Gene ID: HRGMv2_0060_8_27
Type: TC
Location: 26906 - 27136 (+)
Type: TC
Location: 26906 - 27136 (+)
Gene ID: HRGMv2_0060_8_28
Type: TC
Location: 27133 - 27606 (+)
Type: TC
Location: 27133 - 27606 (+)
Gene ID: HRGMv2_0060_8_29
Type: CAZyme
Location: 27680 - 29830 (-)
Type: CAZyme
Location: 27680 - 29830 (-)
Gene ID: HRGMv2_0060_8_30
Type: pfam
Location: 29872 - 30156 (-)
Type: pfam
Location: 29872 - 30156 (-)
Gene ID: HRGMv2_0060_8_31
Type: TC
Location: 30426 - 32108 (-)
Type: TC
Location: 30426 - 32108 (-)
Gene ID: HRGMv2_0060_8_32
Type: pfam
Location: 32427 - 33311 (+)
Type: pfam
Location: 32427 - 33311 (+)
Gene ID: HRGMv2_0060_8_33
Type: sulfatase
Location: 33298 - 35091 (+)
Type: sulfatase
Location: 33298 - 35091 (+)
Gene ID: HRGMv2_0060_8_34
Type: TC
Location: 35088 - 36644 (+)
Type: TC
Location: 35088 - 36644 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.