Cluster: HRGMv2_0060_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0060
- CGC Family ID: CGCFAM_00898
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0060_7 | HRGMv2_0060_7_27 | 32765 | 34018 | + | 3.A.1.1.44 |
| TC | HRGMv2_0060_7 | HRGMv2_0060_7_28 | 34161 | 35144 | + | 3.A.1.1.11 |
| TC | HRGMv2_0060_7 | HRGMv2_0060_7_29 | 35137 | 35958 | + | 3.A.1.1.36 |
| CAZyme | HRGMv2_0060_7 | HRGMv2_0060_7_30 | 35964 | 37343 | + | GH29 |
Gene ID: HRGMv2_0060_7_27
Type: TC
Location: 32765 - 34018 (+)
Type: TC
Location: 32765 - 34018 (+)
Gene ID: HRGMv2_0060_7_28
Type: TC
Location: 34161 - 35144 (+)
Type: TC
Location: 34161 - 35144 (+)
Gene ID: HRGMv2_0060_7_29
Type: TC
Location: 35137 - 35958 (+)
Type: TC
Location: 35137 - 35958 (+)
Gene ID: HRGMv2_0060_7_30
Type: CAZyme
Location: 35964 - 37343 (+)
Type: CAZyme
Location: 35964 - 37343 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.