Cluster: HRGMv2_0060_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0060
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0060_3 | HRGMv2_0060_3_28 | 31692 | 32477 | + | GT2 |
| pfam | HRGMv2_0060_3 | HRGMv2_0060_3_29 | 32474 | 32839 | - | RbpA |
| pfam | HRGMv2_0060_3 | HRGMv2_0060_3_30 | 33003 | 33746 | + | PAP2_3 |
| TC | HRGMv2_0060_3 | HRGMv2_0060_3_31 | 33780 | 35294 | + | 3.A.9.1.1 |
Gene ID: HRGMv2_0060_3_28
Type: CAZyme
Location: 31692 - 32477 (+)
Type: CAZyme
Location: 31692 - 32477 (+)
Gene ID: HRGMv2_0060_3_29
Type: pfam
Location: 32474 - 32839 (-)
Type: pfam
Location: 32474 - 32839 (-)
Gene ID: HRGMv2_0060_3_30
Type: pfam
Location: 33003 - 33746 (+)
Type: pfam
Location: 33003 - 33746 (+)
Gene ID: HRGMv2_0060_3_31
Type: TC
Location: 33780 - 35294 (+)
Type: TC
Location: 33780 - 35294 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.