Cluster: HRGMv2_0060_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0060
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0060_69 | HRGMv2_0060_69_5 | 4570 | 5538 | - | 2.A.7.18.1 |
| TF | HRGMv2_0060_69 | HRGMv2_0060_69_6 | 5535 | 7364 | - | 0040266 |
| pfam | HRGMv2_0060_69 | HRGMv2_0060_69_7 | 7459 | 9009 | - | DUF2142 |
| CAZyme | HRGMv2_0060_69 | HRGMv2_0060_69_8 | 9038 | 10201 | - | GT4 |
| CAZyme | HRGMv2_0060_69 | HRGMv2_0060_69_9 | 10301 | 11416 | + | GT4 |
| CAZyme | HRGMv2_0060_69 | HRGMv2_0060_69_10 | 11413 | 12258 | + | GT2 |
Gene ID: HRGMv2_0060_69_5
Type: TC
Location: 4570 - 5538 (-)
Type: TC
Location: 4570 - 5538 (-)
Gene ID: HRGMv2_0060_69_6
Type: TF
Location: 5535 - 7364 (-)
Type: TF
Location: 5535 - 7364 (-)
Gene ID: HRGMv2_0060_69_7
Type: pfam
Location: 7459 - 9009 (-)
Type: pfam
Location: 7459 - 9009 (-)
Gene ID: HRGMv2_0060_69_8
Type: CAZyme
Location: 9038 - 10201 (-)
Type: CAZyme
Location: 9038 - 10201 (-)
Gene ID: HRGMv2_0060_69_9
Type: CAZyme
Location: 10301 - 11416 (+)
Type: CAZyme
Location: 10301 - 11416 (+)
Gene ID: HRGMv2_0060_69_10
Type: CAZyme
Location: 11413 - 12258 (+)
Type: CAZyme
Location: 11413 - 12258 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.