Cluster: HRGMv2_0060_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0060
- CGC Family ID: CGCFAM_01436
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0060_67 | HRGMv2_0060_67_7 | 7596 | 8474 | - | 3.A.1.15.9 |
| TC | HRGMv2_0060_67 | HRGMv2_0060_67_8 | 8471 | 9187 | - | 3.A.1.15.7 |
| pfam | HRGMv2_0060_67 | HRGMv2_0060_67_9 | 9187 | 10332 | - | ZnuA |
| CAZyme | HRGMv2_0060_67 | HRGMv2_0060_67_10 | 10482 | 12227 | + | GT39 |
Gene ID: HRGMv2_0060_67_7
Type: TC
Location: 7596 - 8474 (-)
Type: TC
Location: 7596 - 8474 (-)
Gene ID: HRGMv2_0060_67_8
Type: TC
Location: 8471 - 9187 (-)
Type: TC
Location: 8471 - 9187 (-)
Gene ID: HRGMv2_0060_67_9
Type: pfam
Location: 9187 - 10332 (-)
Type: pfam
Location: 9187 - 10332 (-)
Gene ID: HRGMv2_0060_67_10
Type: CAZyme
Location: 10482 - 12227 (+)
Type: CAZyme
Location: 10482 - 12227 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.