Cluster: HRGMv2_0060_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0060
- CGC Family ID: CGCFAM_01790
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0060_34 | HRGMv2_0060_34_12 | 13200 | 14135 | + | 3.A.1.1.34 |
| TC | HRGMv2_0060_34 | HRGMv2_0060_34_13 | 14132 | 14977 | + | 3.A.1.1.31 |
| CAZyme | HRGMv2_0060_34 | HRGMv2_0060_34_14 | 14974 | 16545 | + | GH66 |
| CAZyme | HRGMv2_0060_34 | HRGMv2_0060_34_15 | 16532 | 18265 | + | GH13_31 |
Gene ID: HRGMv2_0060_34_12
Type: TC
Location: 13200 - 14135 (+)
Type: TC
Location: 13200 - 14135 (+)
Gene ID: HRGMv2_0060_34_13
Type: TC
Location: 14132 - 14977 (+)
Type: TC
Location: 14132 - 14977 (+)
Gene ID: HRGMv2_0060_34_14
Type: CAZyme
Location: 14974 - 16545 (+)
Type: CAZyme
Location: 14974 - 16545 (+)
Gene ID: HRGMv2_0060_34_15
Type: CAZyme
Location: 16532 - 18265 (+)
Type: CAZyme
Location: 16532 - 18265 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.