Cluster: HRGMv2_0060_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0060
- CGC Family ID: CGCFAM_02614
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0060_32 | HRGMv2_0060_32_15 | 16059 | 17873 | - | 3.A.1.106.2 |
| CAZyme | HRGMv2_0060_32 | HRGMv2_0060_32_16 | 17875 | 18990 | - | GT4 |
| CAZyme | HRGMv2_0060_32 | HRGMv2_0060_32_17 | 18990 | 20198 | - | GT4 |
| CAZyme | HRGMv2_0060_32 | HRGMv2_0060_32_18 | 20195 | 21346 | - | GT1 |
| TC | HRGMv2_0060_32 | HRGMv2_0060_32_19 | 21670 | 23685 | + | 4.A.1.2.5 |
Gene ID: HRGMv2_0060_32_15
Type: TC
Location: 16059 - 17873 (-)
Type: TC
Location: 16059 - 17873 (-)
Gene ID: HRGMv2_0060_32_16
Type: CAZyme
Location: 17875 - 18990 (-)
Type: CAZyme
Location: 17875 - 18990 (-)
Gene ID: HRGMv2_0060_32_17
Type: CAZyme
Location: 18990 - 20198 (-)
Type: CAZyme
Location: 18990 - 20198 (-)
Gene ID: HRGMv2_0060_32_18
Type: CAZyme
Location: 20195 - 21346 (-)
Type: CAZyme
Location: 20195 - 21346 (-)
Gene ID: HRGMv2_0060_32_19
Type: TC
Location: 21670 - 23685 (+)
Type: TC
Location: 21670 - 23685 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.