Cluster: HRGMv2_0060_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0060
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0060_19 | HRGMv2_0060_19_24 | 24624 | 25547 | + | 3.A.1.105.9 |
| pfam | HRGMv2_0060_19 | HRGMv2_0060_19_25 | 25534 | 26295 | + | ABC2_membrane | ABC2_membrane_3 |
| STP | HRGMv2_0060_19 | HRGMv2_0060_19_26 | 26318 | 27028 | + | TetR_C | TetR_N |
| CAZyme | HRGMv2_0060_19 | HRGMv2_0060_19_27 | 27025 | 28158 | - | GT1 |
Gene ID: HRGMv2_0060_19_24
Type: TC
Location: 24624 - 25547 (+)
Type: TC
Location: 24624 - 25547 (+)
Gene ID: HRGMv2_0060_19_25
Type: pfam
Location: 25534 - 26295 (+)
Type: pfam
Location: 25534 - 26295 (+)
Gene ID: HRGMv2_0060_19_26
Type: STP
Location: 26318 - 27028 (+)
Type: STP
Location: 26318 - 27028 (+)
Gene ID: HRGMv2_0060_19_27
Type: CAZyme
Location: 27025 - 28158 (-)
Type: CAZyme
Location: 27025 - 28158 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.