Cluster: HRGMv2_0056_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0056
- CGC Family ID: CGCFAM_01061
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0056_25 | HRGMv2_0056_25_2 | 579 | 2471 | + | 2.A.36.3.1 |
| NULL(UNKNOWN) | HRGMv2_0056_25 | HRGMv2_0056_25_3 | 2508 | 3080 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0056_25 | HRGMv2_0056_25_4 | 3299 | 6709 | + | 3.A.1.122.13 |
| peptidase | HRGMv2_0056_25 | HRGMv2_0056_25_5 | 6822 | 7406 | + | C56.UNW |
| pfam | HRGMv2_0056_25 | HRGMv2_0056_25_6 | 7456 | 8367 | + | TatD_DNase |
| CAZyme | HRGMv2_0056_25 | HRGMv2_0056_25_7 | 8587 | 9747 | + | GH23 |
Gene ID: HRGMv2_0056_25_2
Type: TC
Location: 579 - 2471 (+)
Type: TC
Location: 579 - 2471 (+)
Gene ID: HRGMv2_0056_25_3
Type:
Location: 2508 - 3080 (-)
Type:
Location: 2508 - 3080 (-)
Gene ID: HRGMv2_0056_25_4
Type: TC
Location: 3299 - 6709 (+)
Type: TC
Location: 3299 - 6709 (+)
Gene ID: HRGMv2_0056_25_5
Type: peptidase
Location: 6822 - 7406 (+)
Type: peptidase
Location: 6822 - 7406 (+)
Gene ID: HRGMv2_0056_25_6
Type: pfam
Location: 7456 - 8367 (+)
Type: pfam
Location: 7456 - 8367 (+)
Gene ID: HRGMv2_0056_25_7
Type: CAZyme
Location: 8587 - 9747 (+)
Type: CAZyme
Location: 8587 - 9747 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.