Cluster: HRGMv2_0056_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0056
- CGC Family ID: CGCFAM_09141
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0056_13 | HRGMv2_0056_13_6 | 3953 | 6778 | + | CBM13 | GH66 |
| NULL(UNKNOWN) | HRGMv2_0056_13 | HRGMv2_0056_13_7 | 6903 | 7253 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0056_13 | HRGMv2_0056_13_8 | 7500 | 8126 | - | DUF4232 |
| TC | HRGMv2_0056_13 | HRGMv2_0056_13_9 | 8242 | 9744 | - | 2.A.3.1.2 |
| TC | HRGMv2_0056_13 | HRGMv2_0056_13_10 | 9960 | 10652 | + | 9.B.20.1.3 |
Gene ID: HRGMv2_0056_13_6
Type: CAZyme
Location: 3953 - 6778 (+)
Type: CAZyme
Location: 3953 - 6778 (+)
Gene ID: HRGMv2_0056_13_7
Type:
Location: 6903 - 7253 (-)
Type:
Location: 6903 - 7253 (-)
Gene ID: HRGMv2_0056_13_8
Type: pfam
Location: 7500 - 8126 (-)
Type: pfam
Location: 7500 - 8126 (-)
Gene ID: HRGMv2_0056_13_9
Type: TC
Location: 8242 - 9744 (-)
Type: TC
Location: 8242 - 9744 (-)
Gene ID: HRGMv2_0056_13_10
Type: TC
Location: 9960 - 10652 (+)
Type: TC
Location: 9960 - 10652 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.