Cluster: HRGMv2_0056_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0056
- CGC Family ID: CGCFAM_00922
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0056_12 | HRGMv2_0056_12_2 | 161 | 634 | - | 4.A.1.2.6 |
| TC | HRGMv2_0056_12 | HRGMv2_0056_12_3 | 631 | 861 | - | 4.A.1.1.1 |
| TC | HRGMv2_0056_12 | HRGMv2_0056_12_4 | 968 | 2233 | - | 2.A.1.21.21 |
| pfam | HRGMv2_0056_12 | HRGMv2_0056_12_5 | 2230 | 3138 | - | S6PP | Hydrolase_3 |
| CAZyme | HRGMv2_0056_12 | HRGMv2_0056_12_6 | 3198 | 5720 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_0056_12 | HRGMv2_0056_12_7 | 5765 | 6376 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0056_12 | HRGMv2_0056_12_8 | 6408 | 7418 | + | GT2 |
Gene ID: HRGMv2_0056_12_2
Type: TC
Location: 161 - 634 (-)
Type: TC
Location: 161 - 634 (-)
Gene ID: HRGMv2_0056_12_3
Type: TC
Location: 631 - 861 (-)
Type: TC
Location: 631 - 861 (-)
Gene ID: HRGMv2_0056_12_4
Type: TC
Location: 968 - 2233 (-)
Type: TC
Location: 968 - 2233 (-)
Gene ID: HRGMv2_0056_12_5
Type: pfam
Location: 2230 - 3138 (-)
Type: pfam
Location: 2230 - 3138 (-)
Gene ID: HRGMv2_0056_12_6
Type: CAZyme
Location: 3198 - 5720 (+)
Type: CAZyme
Location: 3198 - 5720 (+)
Gene ID: HRGMv2_0056_12_7
Type:
Location: 5765 - 6376 (+)
Type:
Location: 5765 - 6376 (+)
Gene ID: HRGMv2_0056_12_8
Type: CAZyme
Location: 6408 - 7418 (+)
Type: CAZyme
Location: 6408 - 7418 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.