Cluster: HRGMv2_0056_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0056
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0056_6 | HRGMv2_0056_6_19 | 21365 | 22588 | + | GT4 |
| TC | HRGMv2_0056_6 | HRGMv2_0056_6_20 | 22625 | 23413 | + | 3.A.1.6.5 |
| pfam | HRGMv2_0056_6 | HRGMv2_0056_6_21 | 23423 | 23896 | + | NfeD |
| TC | HRGMv2_0056_6 | HRGMv2_0056_6_22 | 23939 | 24898 | + | 8.A.21.2.2 |
Gene ID: HRGMv2_0056_6_19
Type: CAZyme
Location: 21365 - 22588 (+)
Type: CAZyme
Location: 21365 - 22588 (+)
Gene ID: HRGMv2_0056_6_20
Type: TC
Location: 22625 - 23413 (+)
Type: TC
Location: 22625 - 23413 (+)
Gene ID: HRGMv2_0056_6_21
Type: pfam
Location: 23423 - 23896 (+)
Type: pfam
Location: 23423 - 23896 (+)
Gene ID: HRGMv2_0056_6_22
Type: TC
Location: 23939 - 24898 (+)
Type: TC
Location: 23939 - 24898 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0056_6_22 | vegan > omnivore | 1.72204 | 0.00483 |
| HRGMv2_0056_6_22 | vegetarian > omnivore | 1.56696 | 0.03728 |