Cluster: HRGMv2_0056_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0056
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0056_6 | HRGMv2_0056_6_9 | 11069 | 11695 | + | 4.F.1.3.1 |
| pfam | HRGMv2_0056_6 | HRGMv2_0056_6_10 | 11692 | 12618 | + | Lip_A_acyltrans |
| CAZyme | HRGMv2_0056_6 | HRGMv2_0056_6_11 | 12615 | 13796 | + | GT4 |
Gene ID: HRGMv2_0056_6_9
Type: TC
Location: 11069 - 11695 (+)
Type: TC
Location: 11069 - 11695 (+)
Gene ID: HRGMv2_0056_6_10
Type: pfam
Location: 11692 - 12618 (+)
Type: pfam
Location: 11692 - 12618 (+)
Gene ID: HRGMv2_0056_6_11
Type: CAZyme
Location: 12615 - 13796 (+)
Type: CAZyme
Location: 12615 - 13796 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.