Cluster: HRGMv2_0056_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0056
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0056_118 | HRGMv2_0056_118_4 | 1390 | 2370 | + | 2.A.7.3.62 |
| CAZyme | HRGMv2_0056_118 | HRGMv2_0056_118_5 | 2494 | 3924 | + | GH1 |
| TC | HRGMv2_0056_118 | HRGMv2_0056_118_6 | 3956 | 5404 | + | 4.A.1.2.6 |
Gene ID: HRGMv2_0056_118_4
Type: TC
Location: 1390 - 2370 (+)
Type: TC
Location: 1390 - 2370 (+)
Gene ID: HRGMv2_0056_118_5
Type: CAZyme
Location: 2494 - 3924 (+)
Type: CAZyme
Location: 2494 - 3924 (+)
Gene ID: HRGMv2_0056_118_6
Type: TC
Location: 3956 - 5404 (+)
Type: TC
Location: 3956 - 5404 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0056_118_6 | vegan > omnivore | 1.24317 | 0.00483 |