Cluster: HRGMv2_0056_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0056
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0056_2 | HRGMv2_0056_2_19 | 17287 | 18801 | - | 1.A.33.1.4 |
| pfam | HRGMv2_0056_2 | HRGMv2_0056_2_20 | 18835 | 19578 | - | PAP2_3 |
| pfam | HRGMv2_0056_2 | HRGMv2_0056_2_21 | 19742 | 20107 | + | RbpA |
| CAZyme | HRGMv2_0056_2 | HRGMv2_0056_2_22 | 20108 | 20890 | - | GT2 |
Gene ID: HRGMv2_0056_2_19
Type: TC
Location: 17287 - 18801 (-)
Type: TC
Location: 17287 - 18801 (-)
Gene ID: HRGMv2_0056_2_20
Type: pfam
Location: 18835 - 19578 (-)
Type: pfam
Location: 18835 - 19578 (-)
Gene ID: HRGMv2_0056_2_21
Type: pfam
Location: 19742 - 20107 (+)
Type: pfam
Location: 19742 - 20107 (+)
Gene ID: HRGMv2_0056_2_22
Type: CAZyme
Location: 20108 - 20890 (-)
Type: CAZyme
Location: 20108 - 20890 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.