Cluster: HRGMv2_0056_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0056
- CGC Family ID: CGCFAM_03921
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0056_91 | HRGMv2_0056_91_1 | 2 | 1252 | - | 3.B.1.1.2 |
| sulfatase | HRGMv2_0056_91 | HRGMv2_0056_91_2 | 1249 | 3042 | - | S1_37 |
| pfam | HRGMv2_0056_91 | HRGMv2_0056_91_3 | 3029 | 3913 | - | BPL_C | BPL_LplA_LipB |
| TC | HRGMv2_0056_91 | HRGMv2_0056_91_4 | 4233 | 5915 | + | 3.A.1.120.6 |
| pfam | HRGMv2_0056_91 | HRGMv2_0056_91_5 | 6187 | 6471 | + | PTS_EIIB |
| CAZyme | HRGMv2_0056_91 | HRGMv2_0056_91_6 | 6513 | 8588 | + | GH77 |
Gene ID: HRGMv2_0056_91_1
Type: TC
Location: 2 - 1252 (-)
Type: TC
Location: 2 - 1252 (-)
Gene ID: HRGMv2_0056_91_2
Type: sulfatase
Location: 1249 - 3042 (-)
Type: sulfatase
Location: 1249 - 3042 (-)
Gene ID: HRGMv2_0056_91_3
Type: pfam
Location: 3029 - 3913 (-)
Type: pfam
Location: 3029 - 3913 (-)
Gene ID: HRGMv2_0056_91_4
Type: TC
Location: 4233 - 5915 (+)
Type: TC
Location: 4233 - 5915 (+)
Gene ID: HRGMv2_0056_91_5
Type: pfam
Location: 6187 - 6471 (+)
Type: pfam
Location: 6187 - 6471 (+)
Gene ID: HRGMv2_0056_91_6
Type: CAZyme
Location: 6513 - 8588 (+)
Type: CAZyme
Location: 6513 - 8588 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.