Cluster: HRGMv2_0056_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0056
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0056_90 | HRGMv2_0056_90_2 | 482 | 1360 | + | 3.A.1.1.28 |
| TC | HRGMv2_0056_90 | HRGMv2_0056_90_3 | 1347 | 2192 | + | 3.A.1.1.18 |
| TC | HRGMv2_0056_90 | HRGMv2_0056_90_4 | 2223 | 3545 | + | 3.A.1.1.26 |
| CAZyme | HRGMv2_0056_90 | HRGMv2_0056_90_5 | 3614 | 4309 | + | CE14 |
| CAZyme | HRGMv2_0056_90 | HRGMv2_0056_90_6 | 4426 | 5799 | - | GH4 |
Gene ID: HRGMv2_0056_90_2
Type: TC
Location: 482 - 1360 (+)
Type: TC
Location: 482 - 1360 (+)
Gene ID: HRGMv2_0056_90_3
Type: TC
Location: 1347 - 2192 (+)
Type: TC
Location: 1347 - 2192 (+)
Gene ID: HRGMv2_0056_90_4
Type: TC
Location: 2223 - 3545 (+)
Type: TC
Location: 2223 - 3545 (+)
Gene ID: HRGMv2_0056_90_5
Type: CAZyme
Location: 3614 - 4309 (+)
Type: CAZyme
Location: 3614 - 4309 (+)
Gene ID: HRGMv2_0056_90_6
Type: CAZyme
Location: 4426 - 5799 (-)
Type: CAZyme
Location: 4426 - 5799 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.