Cluster: HRGMv2_0056_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0056
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0056_50 | HRGMv2_0056_50_5 | 3764 | 4738 | - | 2.A.7.18.1 |
| TF | HRGMv2_0056_50 | HRGMv2_0056_50_6 | 4735 | 6564 | - | 0040266 |
| pfam | HRGMv2_0056_50 | HRGMv2_0056_50_7 | 6659 | 8212 | - | DUF2142 |
| CAZyme | HRGMv2_0056_50 | HRGMv2_0056_50_8 | 8241 | 9404 | - | GT4 |
| CAZyme | HRGMv2_0056_50 | HRGMv2_0056_50_9 | 9504 | 10619 | + | GT4 |
| CAZyme | HRGMv2_0056_50 | HRGMv2_0056_50_10 | 10616 | 11605 | + | GT2 |
Gene ID: HRGMv2_0056_50_5
Type: TC
Location: 3764 - 4738 (-)
Type: TC
Location: 3764 - 4738 (-)
Gene ID: HRGMv2_0056_50_6
Type: TF
Location: 4735 - 6564 (-)
Type: TF
Location: 4735 - 6564 (-)
Gene ID: HRGMv2_0056_50_7
Type: pfam
Location: 6659 - 8212 (-)
Type: pfam
Location: 6659 - 8212 (-)
Gene ID: HRGMv2_0056_50_8
Type: CAZyme
Location: 8241 - 9404 (-)
Type: CAZyme
Location: 8241 - 9404 (-)
Gene ID: HRGMv2_0056_50_9
Type: CAZyme
Location: 9504 - 10619 (+)
Type: CAZyme
Location: 9504 - 10619 (+)
Gene ID: HRGMv2_0056_50_10
Type: CAZyme
Location: 10616 - 11605 (+)
Type: CAZyme
Location: 10616 - 11605 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.