Cluster: HRGMv2_0056_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0056
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0056_42 | HRGMv2_0056_42_2 | 1567 | 2496 | - | 3.A.1.1.36 |
| TC | HRGMv2_0056_42 | HRGMv2_0056_42_3 | 2493 | 3404 | - | 3.A.1.1.4 |
| STP | HRGMv2_0056_42 | HRGMv2_0056_42_4 | 3511 | 4923 | - | SBP_bac_1 |
| CAZyme | HRGMv2_0056_42 | HRGMv2_0056_42_5 | 5088 | 7811 | - | GH2 |
Gene ID: HRGMv2_0056_42_2
Type: TC
Location: 1567 - 2496 (-)
Type: TC
Location: 1567 - 2496 (-)
Gene ID: HRGMv2_0056_42_3
Type: TC
Location: 2493 - 3404 (-)
Type: TC
Location: 2493 - 3404 (-)
Gene ID: HRGMv2_0056_42_4
Type: STP
Location: 3511 - 4923 (-)
Type: STP
Location: 3511 - 4923 (-)
Gene ID: HRGMv2_0056_42_5
Type: CAZyme
Location: 5088 - 7811 (-)
Type: CAZyme
Location: 5088 - 7811 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.