Cluster: HRGMv2_0056_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0056
- CGC Family ID: CGCFAM_03736
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0056_40 | HRGMv2_0056_40_2 | 3391 | 4938 | + | 3.D.4.3.2 |
| TC | HRGMv2_0056_40 | HRGMv2_0056_40_3 | 4953 | 6074 | + | 3.D.4.3.2 |
| TC | HRGMv2_0056_40 | HRGMv2_0056_40_4 | 6291 | 7871 | + | 3.A.1.129.1 |
| TC | HRGMv2_0056_40 | HRGMv2_0056_40_5 | 7868 | 9622 | + | 3.A.1.129.1 |
| STP | HRGMv2_0056_40 | HRGMv2_0056_40_6 | 9619 | 11265 | + | GAF | HATPase_c |
| CAZyme | HRGMv2_0056_40 | HRGMv2_0056_40_7 | 11373 | 14975 | - | CBM47 | GH29 |
Gene ID: HRGMv2_0056_40_2
Type: TC
Location: 3391 - 4938 (+)
Type: TC
Location: 3391 - 4938 (+)
Gene ID: HRGMv2_0056_40_3
Type: TC
Location: 4953 - 6074 (+)
Type: TC
Location: 4953 - 6074 (+)
Gene ID: HRGMv2_0056_40_4
Type: TC
Location: 6291 - 7871 (+)
Type: TC
Location: 6291 - 7871 (+)
Gene ID: HRGMv2_0056_40_5
Type: TC
Location: 7868 - 9622 (+)
Type: TC
Location: 7868 - 9622 (+)
Gene ID: HRGMv2_0056_40_6
Type: STP
Location: 9619 - 11265 (+)
Type: STP
Location: 9619 - 11265 (+)
Gene ID: HRGMv2_0056_40_7
Type: CAZyme
Location: 11373 - 14975 (-)
Type: CAZyme
Location: 11373 - 14975 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.