Cluster: HRGMv2_0056_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0056
- CGC Family ID: CGCFAM_01790
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0056_1 | HRGMv2_0056_1_47 | 61831 | 63129 | + | 3.A.1.1.20 |
| TC | HRGMv2_0056_1 | HRGMv2_0056_1_48 | 63197 | 64132 | + | 3.A.1.1.11 |
| TC | HRGMv2_0056_1 | HRGMv2_0056_1_49 | 64129 | 64974 | + | 3.A.1.1.31 |
| CAZyme | HRGMv2_0056_1 | HRGMv2_0056_1_50 | 64971 | 66542 | + | GH66 |
| CAZyme | HRGMv2_0056_1 | HRGMv2_0056_1_51 | 66529 | 68262 | + | GH13_31 |
Gene ID: HRGMv2_0056_1_47
Type: TC
Location: 61831 - 63129 (+)
Type: TC
Location: 61831 - 63129 (+)
Gene ID: HRGMv2_0056_1_48
Type: TC
Location: 63197 - 64132 (+)
Type: TC
Location: 63197 - 64132 (+)
Gene ID: HRGMv2_0056_1_49
Type: TC
Location: 64129 - 64974 (+)
Type: TC
Location: 64129 - 64974 (+)
Gene ID: HRGMv2_0056_1_50
Type: CAZyme
Location: 64971 - 66542 (+)
Type: CAZyme
Location: 64971 - 66542 (+)
Gene ID: HRGMv2_0056_1_51
Type: CAZyme
Location: 66529 - 68262 (+)
Type: CAZyme
Location: 66529 - 68262 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia odontolytica_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.