Cluster: HRGMv2_0054_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0054
- CGC Family ID: CGCFAM_01790
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0054_6 | HRGMv2_0054_6_2 | 2096 | 3400 | + | 3.A.1.1.20 |
| TC | HRGMv2_0054_6 | HRGMv2_0054_6_3 | 3468 | 4403 | + | 3.A.1.1.34 |
| TC | HRGMv2_0054_6 | HRGMv2_0054_6_4 | 4400 | 5245 | + | 3.A.1.1.31 |
| CAZyme | HRGMv2_0054_6 | HRGMv2_0054_6_5 | 5242 | 6813 | + | GH66 |
| CAZyme | HRGMv2_0054_6 | HRGMv2_0054_6_6 | 6800 | 8533 | + | GH13_31 |
Gene ID: HRGMv2_0054_6_2
Type: TC
Location: 2096 - 3400 (+)
Type: TC
Location: 2096 - 3400 (+)
Gene ID: HRGMv2_0054_6_3
Type: TC
Location: 3468 - 4403 (+)
Type: TC
Location: 3468 - 4403 (+)
Gene ID: HRGMv2_0054_6_4
Type: TC
Location: 4400 - 5245 (+)
Type: TC
Location: 4400 - 5245 (+)
Gene ID: HRGMv2_0054_6_5
Type: CAZyme
Location: 5242 - 6813 (+)
Type: CAZyme
Location: 5242 - 6813 (+)
Gene ID: HRGMv2_0054_6_6
Type: CAZyme
Location: 6800 - 8533 (+)
Type: CAZyme
Location: 6800 - 8533 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.