Cluster: HRGMv2_0054_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0054
- CGC Family ID: CGCFAM_02770
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0054_59 | HRGMv2_0054_59_1 | 501 | 2501 | + | 2.A.67.4.3 |
| CAZyme | HRGMv2_0054_59 | HRGMv2_0054_59_2 | 2766 | 4385 | + | GH2 |
| pfam | HRGMv2_0054_59 | HRGMv2_0054_59_3 | 4490 | 9055 | - | BcrAD_BadFG | BcrAD_BadFG | DUF2229 |
| TC | HRGMv2_0054_59 | HRGMv2_0054_59_4 | 9274 | 11253 | - | 3.A.1.8.2 |
Gene ID: HRGMv2_0054_59_1
Type: TC
Location: 501 - 2501 (+)
Type: TC
Location: 501 - 2501 (+)
Gene ID: HRGMv2_0054_59_2
Type: CAZyme
Location: 2766 - 4385 (+)
Type: CAZyme
Location: 2766 - 4385 (+)
Gene ID: HRGMv2_0054_59_3
Type: pfam
Location: 4490 - 9055 (-)
Type: pfam
Location: 4490 - 9055 (-)
Gene ID: HRGMv2_0054_59_4
Type: TC
Location: 9274 - 11253 (-)
Type: TC
Location: 9274 - 11253 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.