Cluster: HRGMv2_0054_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0054
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0054_46 | HRGMv2_0054_46_10 | 10043 | 11509 | + | GH32 |
| TC | HRGMv2_0054_46 | HRGMv2_0054_46_11 | 11708 | 13756 | + | 4.A.1.2.12 |
| TF | HRGMv2_0054_46 | HRGMv2_0054_46_12 | 13852 | 14877 | - | LacI |
| TC | HRGMv2_0054_46 | HRGMv2_0054_46_13 | 15162 | 15428 | + | 8.A.8.1.2 |
| TC | HRGMv2_0054_46 | HRGMv2_0054_46_14 | 15433 | 17115 | + | 8.A.7.1.2 |
Gene ID: HRGMv2_0054_46_10
Type: CAZyme
Location: 10043 - 11509 (+)
Type: CAZyme
Location: 10043 - 11509 (+)
Gene ID: HRGMv2_0054_46_11
Type: TC
Location: 11708 - 13756 (+)
Type: TC
Location: 11708 - 13756 (+)
Gene ID: HRGMv2_0054_46_12
Type: TF
Location: 13852 - 14877 (-)
Type: TF
Location: 13852 - 14877 (-)
Gene ID: HRGMv2_0054_46_13
Type: TC
Location: 15162 - 15428 (+)
Type: TC
Location: 15162 - 15428 (+)
Gene ID: HRGMv2_0054_46_14
Type: TC
Location: 15433 - 17115 (+)
Type: TC
Location: 15433 - 17115 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0054_46_13 | vegan > omnivore | 1.65077 | 0.01856 |