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Cluster: HRGMv2_0054_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0054_26 HRGMv2_0054_26_16 14939 15949 - GT2
NULL(UNKNOWN) HRGMv2_0054_26 HRGMv2_0054_26_17 15981 16592 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0054_26 HRGMv2_0054_26_18 16637 19096 - GH3
pfam HRGMv2_0054_26 HRGMv2_0054_26_19 19219 20127 + S6PP | Hydrolase_3
pfam HRGMv2_0054_26 HRGMv2_0054_26_20 20124 21389 + MFS_3 | MFS_1
TC HRGMv2_0054_26 HRGMv2_0054_26_21 21496 21726 + 4.A.1.1.1
TC HRGMv2_0054_26 HRGMv2_0054_26_22 21723 22196 + 4.A.1.2.6
CAZyme HRGMv2_0054_26 HRGMv2_0054_26_23 22267 24417 - GH77
pfam HRGMv2_0054_26 HRGMv2_0054_26_24 24458 24742 - PTS_EIIB
TC HRGMv2_0054_26 HRGMv2_0054_26_25 25010 25444 - 3.A.1.120.5
Gene ID: HRGMv2_0054_26_16
Type: CAZyme
Location: 14939 - 15949 (-)
Gene ID: HRGMv2_0054_26_17
Type:
Location: 15981 - 16592 (-)
Gene ID: HRGMv2_0054_26_18
Type: CAZyme
Location: 16637 - 19096 (-)
Gene ID: HRGMv2_0054_26_19
Type: pfam
Location: 19219 - 20127 (+)
Gene ID: HRGMv2_0054_26_20
Type: pfam
Location: 20124 - 21389 (+)
Gene ID: HRGMv2_0054_26_21
Type: TC
Location: 21496 - 21726 (+)
Gene ID: HRGMv2_0054_26_22
Type: TC
Location: 21723 - 22196 (+)
Gene ID: HRGMv2_0054_26_23
Type: CAZyme
Location: 22267 - 24417 (-)
Gene ID: HRGMv2_0054_26_24
Type: pfam
Location: 24458 - 24742 (-)
Gene ID: HRGMv2_0054_26_25
Type: TC
Location: 25010 - 25444 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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