Cluster: HRGMv2_0046_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0046
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0046_5 | HRGMv2_0046_5_7 | 8233 | 9372 | + | GT28 |
| pfam | HRGMv2_0046_5 | HRGMv2_0046_5_8 | 9473 | 10666 | + | DNA_processg_A | DprA_WH | LDcluster4 |
| TC | HRGMv2_0046_5 | HRGMv2_0046_5_9 | 10678 | 12792 | + | 3.A.7.7.1 |
Gene ID: HRGMv2_0046_5_7
Type: CAZyme
Location: 8233 - 9372 (+)
Type: CAZyme
Location: 8233 - 9372 (+)
Gene ID: HRGMv2_0046_5_8
Type: pfam
Location: 9473 - 10666 (+)
Type: pfam
Location: 9473 - 10666 (+)
Gene ID: HRGMv2_0046_5_9
Type: TC
Location: 10678 - 12792 (+)
Type: TC
Location: 10678 - 12792 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
JAJQAO01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.