Cluster: HRGMv2_0046_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0046
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0046_3 | HRGMv2_0046_3_110 | 84962 | 86167 | - | GH171 |
| TC | HRGMv2_0046_3 | HRGMv2_0046_3_111 | 86378 | 87376 | + | 3.A.1.11.1 |
| TC | HRGMv2_0046_3 | HRGMv2_0046_3_112 | 87373 | 88230 | + | 3.A.1.11.1 |
| TC | HRGMv2_0046_3 | HRGMv2_0046_3_113 | 88211 | 88999 | + | 3.A.1.11.1 |
| TC | HRGMv2_0046_3 | HRGMv2_0046_3_114 | 89018 | 90076 | + | 3.A.1.11.1 |
Gene ID: HRGMv2_0046_3_110
Type: CAZyme
Location: 84962 - 86167 (-)
Type: CAZyme
Location: 84962 - 86167 (-)
Gene ID: HRGMv2_0046_3_111
Type: TC
Location: 86378 - 87376 (+)
Type: TC
Location: 86378 - 87376 (+)
Gene ID: HRGMv2_0046_3_112
Type: TC
Location: 87373 - 88230 (+)
Type: TC
Location: 87373 - 88230 (+)
Gene ID: HRGMv2_0046_3_113
Type: TC
Location: 88211 - 88999 (+)
Type: TC
Location: 88211 - 88999 (+)
Gene ID: HRGMv2_0046_3_114
Type: TC
Location: 89018 - 90076 (+)
Type: TC
Location: 89018 - 90076 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
JAJQAO01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.