Cluster: HRGMv2_0046_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0046
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0046_2 | HRGMv2_0046_2_115 | 115161 | 116033 | + | CE4 |
| pfam | HRGMv2_0046_2 | HRGMv2_0046_2_116 | 116030 | 116866 | + | Polysacc_deac_1 |
| STP | HRGMv2_0046_2 | HRGMv2_0046_2_117 | 116887 | 117717 | + | SBP_bac_3 |
| TC | HRGMv2_0046_2 | HRGMv2_0046_2_118 | 117734 | 118390 | + | 3.A.1.3.15 |
| TC | HRGMv2_0046_2 | HRGMv2_0046_2_119 | 118383 | 119108 | + | 3.A.1.3.15 |
Gene ID: HRGMv2_0046_2_115
Type: CAZyme
Location: 115161 - 116033 (+)
Type: CAZyme
Location: 115161 - 116033 (+)
Gene ID: HRGMv2_0046_2_116
Type: pfam
Location: 116030 - 116866 (+)
Type: pfam
Location: 116030 - 116866 (+)
Gene ID: HRGMv2_0046_2_117
Type: STP
Location: 116887 - 117717 (+)
Type: STP
Location: 116887 - 117717 (+)
Gene ID: HRGMv2_0046_2_118
Type: TC
Location: 117734 - 118390 (+)
Type: TC
Location: 117734 - 118390 (+)
Gene ID: HRGMv2_0046_2_119
Type: TC
Location: 118383 - 119108 (+)
Type: TC
Location: 118383 - 119108 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
JAJQAO01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.