Cluster: HRGMv2_0045_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0045
- CGC Family ID: CGCFAM_02328
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0045_59 | HRGMv2_0045_59_1 | 2 | 445 | - | GT2 |
| CAZyme | HRGMv2_0045_59 | HRGMv2_0045_59_2 | 446 | 1273 | - | GT2 |
| TC | HRGMv2_0045_59 | HRGMv2_0045_59_3 | 1276 | 2700 | - | 9.B.18.1.2 |
| NULL(UNKNOWN) | HRGMv2_0045_59 | HRGMv2_0045_59_4 | 3104 | 3424 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0045_59 | HRGMv2_0045_59_5 | 3778 | 5706 | - | 1.B.14.1.4 |
Gene ID: HRGMv2_0045_59_1
Type: CAZyme
Location: 2 - 445 (-)
Type: CAZyme
Location: 2 - 445 (-)
Gene ID: HRGMv2_0045_59_2
Type: CAZyme
Location: 446 - 1273 (-)
Type: CAZyme
Location: 446 - 1273 (-)
Gene ID: HRGMv2_0045_59_3
Type: TC
Location: 1276 - 2700 (-)
Type: TC
Location: 1276 - 2700 (-)
Gene ID: HRGMv2_0045_59_4
Type:
Location: 3104 - 3424 (-)
Type:
Location: 3104 - 3424 (-)
Gene ID: HRGMv2_0045_59_5
Type: TC
Location: 3778 - 5706 (-)
Type: TC
Location: 3778 - 5706 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.