Cluster: HRGMv2_0045_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0045
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0045_56 | HRGMv2_0045_56_4 | 2009 | 3259 | + | 2.A.16.2.2 |
| pfam | HRGMv2_0045_56 | HRGMv2_0045_56_5 | 3263 | 3937 | - | Lactamase_B | Lactamase_B_2 | Lactamase_B_3 |
| CAZyme | HRGMv2_0045_56 | HRGMv2_0045_56_6 | 4076 | 5047 | + | GH73 |
| pfam | HRGMv2_0045_56 | HRGMv2_0045_56_7 | 5093 | 5572 | + | SpoU_methylase |
| pfam | HRGMv2_0045_56 | HRGMv2_0045_56_8 | 5569 | 5925 | + | PTPS |
| TC | HRGMv2_0045_56 | HRGMv2_0045_56_9 | 5925 | 6701 | + | 9.B.10.1.1 |
Gene ID: HRGMv2_0045_56_4
Type: TC
Location: 2009 - 3259 (+)
Type: TC
Location: 2009 - 3259 (+)
Gene ID: HRGMv2_0045_56_5
Type: pfam
Location: 3263 - 3937 (-)
Type: pfam
Location: 3263 - 3937 (-)
Gene ID: HRGMv2_0045_56_6
Type: CAZyme
Location: 4076 - 5047 (+)
Type: CAZyme
Location: 4076 - 5047 (+)
Gene ID: HRGMv2_0045_56_7
Type: pfam
Location: 5093 - 5572 (+)
Type: pfam
Location: 5093 - 5572 (+)
Gene ID: HRGMv2_0045_56_8
Type: pfam
Location: 5569 - 5925 (+)
Type: pfam
Location: 5569 - 5925 (+)
Gene ID: HRGMv2_0045_56_9
Type: TC
Location: 5925 - 6701 (+)
Type: TC
Location: 5925 - 6701 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.