Cluster: HRGMv2_0045_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0045
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0045_11 | HRGMv2_0045_11_11 | 12446 | 13549 | - | GT28 |
| pfam | HRGMv2_0045_11 | HRGMv2_0045_11_12 | 13546 | 14919 | - | Mur_ligase_C | Mur_ligase_M |
| TC | HRGMv2_0045_11 | HRGMv2_0045_11_13 | 14946 | 15884 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_0045_11_11
Type: CAZyme
Location: 12446 - 13549 (-)
Type: CAZyme
Location: 12446 - 13549 (-)
Gene ID: HRGMv2_0045_11_12
Type: pfam
Location: 13546 - 14919 (-)
Type: pfam
Location: 13546 - 14919 (-)
Gene ID: HRGMv2_0045_11_13
Type: TC
Location: 14946 - 15884 (-)
Type: TC
Location: 14946 - 15884 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.