Cluster: HRGMv2_0045_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0045
- CGC Family ID: CGCFAM_00451
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0045_10 | HRGMv2_0045_10_51 | 52235 | 53716 | + | 2.A.80.1.1 |
| TC | HRGMv2_0045_10 | HRGMv2_0045_10_52 | 53924 | 54850 | + | 2.A.19.5.2 |
| CAZyme | HRGMv2_0045_10 | HRGMv2_0045_10_53 | 55378 | 56334 | + | GT2 |
Gene ID: HRGMv2_0045_10_51
Type: TC
Location: 52235 - 53716 (+)
Type: TC
Location: 52235 - 53716 (+)
Gene ID: HRGMv2_0045_10_52
Type: TC
Location: 53924 - 54850 (+)
Type: TC
Location: 53924 - 54850 (+)
Gene ID: HRGMv2_0045_10_53
Type: CAZyme
Location: 55378 - 56334 (+)
Type: CAZyme
Location: 55378 - 56334 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.