Cluster: HRGMv2_0044_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0044
- CGC Family ID: CGCFAM_04820
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0044_25 | HRGMv2_0044_25_16 | 16372 | 17097 | - | 3.A.1.3.15 |
| TC | HRGMv2_0044_25 | HRGMv2_0044_25_17 | 17090 | 17746 | - | 3.A.1.3.15 |
| TC | HRGMv2_0044_25 | HRGMv2_0044_25_18 | 17803 | 18639 | - | 3.A.1.3.23 |
| pfam | HRGMv2_0044_25 | HRGMv2_0044_25_19 | 18685 | 19506 | - | Polysacc_deac_1 |
| CAZyme | HRGMv2_0044_25 | HRGMv2_0044_25_20 | 19490 | 20356 | - | CE4 |
| TC | HRGMv2_0044_25 | HRGMv2_0044_25_21 | 20531 | 21883 | - | 2.A.66.1.32 |
Gene ID: HRGMv2_0044_25_16
Type: TC
Location: 16372 - 17097 (-)
Type: TC
Location: 16372 - 17097 (-)
Gene ID: HRGMv2_0044_25_17
Type: TC
Location: 17090 - 17746 (-)
Type: TC
Location: 17090 - 17746 (-)
Gene ID: HRGMv2_0044_25_18
Type: TC
Location: 17803 - 18639 (-)
Type: TC
Location: 17803 - 18639 (-)
Gene ID: HRGMv2_0044_25_19
Type: pfam
Location: 18685 - 19506 (-)
Type: pfam
Location: 18685 - 19506 (-)
Gene ID: HRGMv2_0044_25_20
Type: CAZyme
Location: 19490 - 20356 (-)
Type: CAZyme
Location: 19490 - 20356 (-)
Gene ID: HRGMv2_0044_25_21
Type: TC
Location: 20531 - 21883 (-)
Type: TC
Location: 20531 - 21883 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
CAG-266
Species
CAG-266 sp003150755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.