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Cluster: HRGMv2_0044_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0044_8 HRGMv2_0044_8_37 38491 39894 + AA4
CAZyme HRGMv2_0044_8 HRGMv2_0044_8_38 39931 41328 + AA4
NULL(UNKNOWN) HRGMv2_0044_8 HRGMv2_0044_8_39 41626 43674 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0044_8 HRGMv2_0044_8_40 43712 45298 - PBP_like_2 | SBP_bac_11
TC HRGMv2_0044_8 HRGMv2_0044_8_41 45492 45812 + 2.A.7.1.10
STP HRGMv2_0044_8 HRGMv2_0044_8_42 46052 47077 + SBP_bac_1
TC HRGMv2_0044_8 HRGMv2_0044_8_43 47178 48275 + 3.A.1.1.16
TC HRGMv2_0044_8 HRGMv2_0044_8_44 48272 49963 + 3.A.1.20.4
Gene ID: HRGMv2_0044_8_37
Type: CAZyme
Location: 38491 - 39894 (+)
Gene ID: HRGMv2_0044_8_38
Type: CAZyme
Location: 39931 - 41328 (+)
Gene ID: HRGMv2_0044_8_39
Type:
Location: 41626 - 43674 (+)
Gene ID: HRGMv2_0044_8_40
Type: pfam
Location: 43712 - 45298 (-)
Gene ID: HRGMv2_0044_8_41
Type: TC
Location: 45492 - 45812 (+)
Gene ID: HRGMv2_0044_8_42
Type: STP
Location: 46052 - 47077 (+)
Gene ID: HRGMv2_0044_8_43
Type: TC
Location: 47178 - 48275 (+)
Gene ID: HRGMv2_0044_8_44
Type: TC
Location: 48272 - 49963 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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