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Cluster: HRGMv2_0043_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0043_167 HRGMv2_0043_167_22 23728 25062 + CE11
pfam HRGMv2_0043_167 HRGMv2_0043_167_23 25078 25887 + Hexapep | Hexapep | Acetyltransf_11
pfam HRGMv2_0043_167 HRGMv2_0043_167_24 25892 26707 + LpxI_C | LpxI_N
CAZyme HRGMv2_0043_167 HRGMv2_0043_167_25 26812 27951 + GT19
TC HRGMv2_0043_167 HRGMv2_0043_167_26 27948 29708 + 3.A.1.106.2
CAZyme HRGMv2_0043_167 HRGMv2_0043_167_27 29727 32258 + GT30
Gene ID: HRGMv2_0043_167_22
Type: CAZyme
Location: 23728 - 25062 (+)
Gene ID: HRGMv2_0043_167_23
Type: pfam
Location: 25078 - 25887 (+)
Gene ID: HRGMv2_0043_167_24
Type: pfam
Location: 25892 - 26707 (+)
Gene ID: HRGMv2_0043_167_25
Type: CAZyme
Location: 26812 - 27951 (+)
Gene ID: HRGMv2_0043_167_26
Type: TC
Location: 27948 - 29708 (+)
Gene ID: HRGMv2_0043_167_27
Type: CAZyme
Location: 29727 - 32258 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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