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Cluster: HRGMv2_0043_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0043_131 HRGMv2_0043_131_7 6810 7805 + 2.A.80.1.3
pfam HRGMv2_0043_131 HRGMv2_0043_131_8 7837 8295 + TctB
TC HRGMv2_0043_131 HRGMv2_0043_131_9 8311 9828 + 2.A.80.1.1
TC HRGMv2_0043_131 HRGMv2_0043_131_10 9892 10656 + 3.A.1.17.2
TC HRGMv2_0043_131 HRGMv2_0043_131_11 10631 11335 + 3.A.1.16.4
TC HRGMv2_0043_131 HRGMv2_0043_131_12 11364 12317 + 3.A.1.17.4
TF HRGMv2_0043_131 HRGMv2_0043_131_13 12483 13115 + LexA_DNA_bind
TC HRGMv2_0043_131 HRGMv2_0043_131_14 13302 14603 - 2.A.118.1.3
pfam HRGMv2_0043_131 HRGMv2_0043_131_15 14844 16022 - GFO_IDH_MocA | GFO_IDH_MocA_C | NAD_binding_3 | GFO_IDH_MocA_C3
NULL(UNKNOWN) HRGMv2_0043_131 HRGMv2_0043_131_16 16074 16409 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0043_131 HRGMv2_0043_131_17 16460 17677 - GT2
Gene ID: HRGMv2_0043_131_7
Type: TC
Location: 6810 - 7805 (+)
Gene ID: HRGMv2_0043_131_8
Type: pfam
Location: 7837 - 8295 (+)
Gene ID: HRGMv2_0043_131_9
Type: TC
Location: 8311 - 9828 (+)
Gene ID: HRGMv2_0043_131_10
Type: TC
Location: 9892 - 10656 (+)
Gene ID: HRGMv2_0043_131_11
Type: TC
Location: 10631 - 11335 (+)
Gene ID: HRGMv2_0043_131_12
Type: TC
Location: 11364 - 12317 (+)
Gene ID: HRGMv2_0043_131_13
Type: TF
Location: 12483 - 13115 (+)
Gene ID: HRGMv2_0043_131_14
Type: TC
Location: 13302 - 14603 (-)
Gene ID: HRGMv2_0043_131_15
Type: pfam
Location: 14844 - 16022 (-)
Gene ID: HRGMv2_0043_131_16
Type:
Location: 16074 - 16409 (-)
Gene ID: HRGMv2_0043_131_17
Type: CAZyme
Location: 16460 - 17677 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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