Cluster: HRGMv2_0042_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0042
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0042_19 | HRGMv2_0042_19_26 | 22123 | 24654 | - | GT30 |
| TC | HRGMv2_0042_19 | HRGMv2_0042_19_27 | 24673 | 26433 | - | 3.A.1.106.2 |
| CAZyme | HRGMv2_0042_19 | HRGMv2_0042_19_28 | 26430 | 27569 | - | GT19 |
| pfam | HRGMv2_0042_19 | HRGMv2_0042_19_29 | 27674 | 28489 | - | LpxI_C | LpxI_N |
| pfam | HRGMv2_0042_19 | HRGMv2_0042_19_30 | 28494 | 29303 | - | Hexapep | Hexapep | Acetyltransf_11 |
| CAZyme | HRGMv2_0042_19 | HRGMv2_0042_19_31 | 29319 | 30653 | - | CE11 |
Gene ID: HRGMv2_0042_19_26
Type: CAZyme
Location: 22123 - 24654 (-)
Type: CAZyme
Location: 22123 - 24654 (-)
Gene ID: HRGMv2_0042_19_27
Type: TC
Location: 24673 - 26433 (-)
Type: TC
Location: 24673 - 26433 (-)
Gene ID: HRGMv2_0042_19_28
Type: CAZyme
Location: 26430 - 27569 (-)
Type: CAZyme
Location: 26430 - 27569 (-)
Gene ID: HRGMv2_0042_19_29
Type: pfam
Location: 27674 - 28489 (-)
Type: pfam
Location: 27674 - 28489 (-)
Gene ID: HRGMv2_0042_19_30
Type: pfam
Location: 28494 - 29303 (-)
Type: pfam
Location: 28494 - 29303 (-)
Gene ID: HRGMv2_0042_19_31
Type: CAZyme
Location: 29319 - 30653 (-)
Type: CAZyme
Location: 29319 - 30653 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus sp905213155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.