Cluster: HRGMv2_0042_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0042
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0042_13 | HRGMv2_0042_13_7 | 5122 | 5892 | - | 9.B.10.1.1 |
| pfam | HRGMv2_0042_13 | HRGMv2_0042_13_8 | 5886 | 6248 | - | PTPS |
| pfam | HRGMv2_0042_13 | HRGMv2_0042_13_9 | 6263 | 6733 | - | SpoU_methylase |
| CAZyme | HRGMv2_0042_13 | HRGMv2_0042_13_10 | 6730 | 7620 | - | GH73 |
| TC | HRGMv2_0042_13 | HRGMv2_0042_13_11 | 7595 | 9040 | - | 2.A.21.3.21 |
Gene ID: HRGMv2_0042_13_7
Type: TC
Location: 5122 - 5892 (-)
Type: TC
Location: 5122 - 5892 (-)
Gene ID: HRGMv2_0042_13_8
Type: pfam
Location: 5886 - 6248 (-)
Type: pfam
Location: 5886 - 6248 (-)
Gene ID: HRGMv2_0042_13_9
Type: pfam
Location: 6263 - 6733 (-)
Type: pfam
Location: 6263 - 6733 (-)
Gene ID: HRGMv2_0042_13_10
Type: CAZyme
Location: 6730 - 7620 (-)
Type: CAZyme
Location: 6730 - 7620 (-)
Gene ID: HRGMv2_0042_13_11
Type: TC
Location: 7595 - 9040 (-)
Type: TC
Location: 7595 - 9040 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus sp905213155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.