Cluster: HRGMv2_0042_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0042
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0042_10 | HRGMv2_0042_10_40 | 39011 | 39790 | + | GT51 |
| pfam | HRGMv2_0042_10 | HRGMv2_0042_10_41 | 39845 | 40687 | - | QRPTase_C | QRPTase_N |
| STP | HRGMv2_0042_10 | HRGMv2_0042_10_42 | 40842 | 42671 | - | SIS | SIS |
| TC | HRGMv2_0042_10 | HRGMv2_0042_10_43 | 43036 | 44034 | + | 3.A.1.11.1 |
| TC | HRGMv2_0042_10 | HRGMv2_0042_10_44 | 44031 | 44891 | + | 3.A.1.11.1 |
| TC | HRGMv2_0042_10 | HRGMv2_0042_10_45 | 44872 | 45669 | + | 3.A.1.11.1 |
Gene ID: HRGMv2_0042_10_40
Type: CAZyme
Location: 39011 - 39790 (+)
Type: CAZyme
Location: 39011 - 39790 (+)
Gene ID: HRGMv2_0042_10_41
Type: pfam
Location: 39845 - 40687 (-)
Type: pfam
Location: 39845 - 40687 (-)
Gene ID: HRGMv2_0042_10_42
Type: STP
Location: 40842 - 42671 (-)
Type: STP
Location: 40842 - 42671 (-)
Gene ID: HRGMv2_0042_10_43
Type: TC
Location: 43036 - 44034 (+)
Type: TC
Location: 43036 - 44034 (+)
Gene ID: HRGMv2_0042_10_44
Type: TC
Location: 44031 - 44891 (+)
Type: TC
Location: 44031 - 44891 (+)
Gene ID: HRGMv2_0042_10_45
Type: TC
Location: 44872 - 45669 (+)
Type: TC
Location: 44872 - 45669 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus sp905213155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.