dbCAN Logo

Cluster: HRGMv2_0042_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0042_3 HRGMv2_0042_3_3 2563 5064 + 1.B.23.1.3
NULL(UNKNOWN) HRGMv2_0042_3 HRGMv2_0042_3_4 5075 5344 + NULL(UNKNOWN)
[View Structural Homologs]
sulfatase HRGMv2_0042_3 HRGMv2_0042_3_5 5341 6951 + S1_97
CAZyme HRGMv2_0042_3 HRGMv2_0042_3_6 6964 7704 + GT26
pfam HRGMv2_0042_3 HRGMv2_0042_3_7 7774 8415 + PS_Dcarbxylase
pfam HRGMv2_0042_3 HRGMv2_0042_3_8 8412 9098 + CDP-OH_P_transf
CAZyme HRGMv2_0042_3 HRGMv2_0042_3_9 9119 10414 + GT2
STP HRGMv2_0042_3 HRGMv2_0042_3_10 10977 11357 + Glyoxalase
NULL(UNKNOWN) HRGMv2_0042_3 HRGMv2_0042_3_11 11454 11822 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0042_3 HRGMv2_0042_3_12 11829 12365 + 1.A.35.3.2
Gene ID: HRGMv2_0042_3_3
Type: TC
Location: 2563 - 5064 (+)
Gene ID: HRGMv2_0042_3_4
Type:
Location: 5075 - 5344 (+)
Gene ID: HRGMv2_0042_3_5
Type: sulfatase
Location: 5341 - 6951 (+)
Gene ID: HRGMv2_0042_3_6
Type: CAZyme
Location: 6964 - 7704 (+)
Gene ID: HRGMv2_0042_3_7
Type: pfam
Location: 7774 - 8415 (+)
Gene ID: HRGMv2_0042_3_8
Type: pfam
Location: 8412 - 9098 (+)
Gene ID: HRGMv2_0042_3_9
Type: CAZyme
Location: 9119 - 10414 (+)
Gene ID: HRGMv2_0042_3_10
Type: STP
Location: 10977 - 11357 (+)
Gene ID: HRGMv2_0042_3_11
Type:
Location: 11454 - 11822 (+)
Gene ID: HRGMv2_0042_3_12
Type: TC
Location: 11829 - 12365 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List