Cluster: HRGMv2_0042_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0042
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0042_2 | HRGMv2_0042_2_54 | 60078 | 60683 | + | GH23 |
| pfam | HRGMv2_0042_2 | HRGMv2_0042_2_55 | 61195 | 62640 | + | PGI |
| pfam | HRGMv2_0042_2 | HRGMv2_0042_2_56 | 62711 | 63409 | + | PNP_UDP_1 |
| TC | HRGMv2_0042_2 | HRGMv2_0042_2_57 | 63511 | 64956 | + | 2.A.3.7.2 |
Gene ID: HRGMv2_0042_2_54
Type: CAZyme
Location: 60078 - 60683 (+)
Type: CAZyme
Location: 60078 - 60683 (+)
Gene ID: HRGMv2_0042_2_55
Type: pfam
Location: 61195 - 62640 (+)
Type: pfam
Location: 61195 - 62640 (+)
Gene ID: HRGMv2_0042_2_56
Type: pfam
Location: 62711 - 63409 (+)
Type: pfam
Location: 62711 - 63409 (+)
Gene ID: HRGMv2_0042_2_57
Type: TC
Location: 63511 - 64956 (+)
Type: TC
Location: 63511 - 64956 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus sp905213155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.