Cluster: HRGMv2_0039_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0039
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0039_8 | HRGMv2_0039_8_7 | 4448 | 6388 | - | 3.A.1.120.6 |
| NULL(UNKNOWN) | HRGMv2_0039_8 | HRGMv2_0039_8_8 | 6649 | 6741 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0039_8 | HRGMv2_0039_8_9 | 6958 | 7392 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0039_8 | HRGMv2_0039_8_10 | 7885 | 8517 | - | GH23 |
Gene ID: HRGMv2_0039_8_7
Type: TC
Location: 4448 - 6388 (-)
Type: TC
Location: 4448 - 6388 (-)
Gene ID: HRGMv2_0039_8_8
Type:
Location: 6649 - 6741 (-)
Type:
Location: 6649 - 6741 (-)
Gene ID: HRGMv2_0039_8_9
Type:
Location: 6958 - 7392 (-)
Type:
Location: 6958 - 7392 (-)
Gene ID: HRGMv2_0039_8_10
Type: CAZyme
Location: 7885 - 8517 (-)
Type: CAZyme
Location: 7885 - 8517 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.