Cluster: HRGMv2_0039_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0039
- CGC Family ID: CGCFAM_03693
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0039_6 | HRGMv2_0039_6_470 | 481575 | 482285 | - | 3.A.1.4.10 |
| TC | HRGMv2_0039_6 | HRGMv2_0039_6_471 | 482272 | 483075 | - | 3.A.1.4.10 |
| TC | HRGMv2_0039_6 | HRGMv2_0039_6_472 | 483068 | 484138 | - | 3.A.1.4.10 |
| TC | HRGMv2_0039_6 | HRGMv2_0039_6_473 | 484141 | 485073 | - | 3.A.1.4.10 |
| TC | HRGMv2_0039_6 | HRGMv2_0039_6_474 | 485151 | 486314 | - | 3.A.1.4.10 |
| TC | HRGMv2_0039_6 | HRGMv2_0039_6_475 | 487019 | 488362 | - | 2.A.25.1.4 |
| CAZyme | HRGMv2_0039_6 | HRGMv2_0039_6_476 | 488745 | 490328 | - | GT83 |
Gene ID: HRGMv2_0039_6_470
Type: TC
Location: 481575 - 482285 (-)
Type: TC
Location: 481575 - 482285 (-)
Gene ID: HRGMv2_0039_6_471
Type: TC
Location: 482272 - 483075 (-)
Type: TC
Location: 482272 - 483075 (-)
Gene ID: HRGMv2_0039_6_472
Type: TC
Location: 483068 - 484138 (-)
Type: TC
Location: 483068 - 484138 (-)
Gene ID: HRGMv2_0039_6_473
Type: TC
Location: 484141 - 485073 (-)
Type: TC
Location: 484141 - 485073 (-)
Gene ID: HRGMv2_0039_6_474
Type: TC
Location: 485151 - 486314 (-)
Type: TC
Location: 485151 - 486314 (-)
Gene ID: HRGMv2_0039_6_475
Type: TC
Location: 487019 - 488362 (-)
Type: TC
Location: 487019 - 488362 (-)
Gene ID: HRGMv2_0039_6_476
Type: CAZyme
Location: 488745 - 490328 (-)
Type: CAZyme
Location: 488745 - 490328 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.