Cluster: HRGMv2_0039_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0039
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0039_6 | HRGMv2_0039_6_385 | 391024 | 392127 | - | GT28 |
| pfam | HRGMv2_0039_6 | HRGMv2_0039_6_386 | 392144 | 393508 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_0039_6 | HRGMv2_0039_6_387 | 393522 | 394484 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_0039_6_385
Type: CAZyme
Location: 391024 - 392127 (-)
Type: CAZyme
Location: 391024 - 392127 (-)
Gene ID: HRGMv2_0039_6_386
Type: pfam
Location: 392144 - 393508 (-)
Type: pfam
Location: 392144 - 393508 (-)
Gene ID: HRGMv2_0039_6_387
Type: TC
Location: 393522 - 394484 (-)
Type: TC
Location: 393522 - 394484 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.