Cluster: HRGMv2_0039_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0039
- CGC Family ID: CGCFAM_00465
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0039_6 | HRGMv2_0039_6_154 | 143374 | 144933 | - | GT83 |
| pfam | HRGMv2_0039_6 | HRGMv2_0039_6_155 | 144933 | 145862 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| TC | HRGMv2_0039_6 | HRGMv2_0039_6_156 | 145910 | 146944 | - | 4.D.2.1.4 |
| pfam | HRGMv2_0039_6 | HRGMv2_0039_6_157 | 146982 | 147830 | - | YdjC |
| pfam | HRGMv2_0039_6 | HRGMv2_0039_6_158 | 147833 | 148780 | - | RNase_HII |
| TC | HRGMv2_0039_6 | HRGMv2_0039_6_159 | 148783 | 151872 | - | 2.A.6.3.5 |
Gene ID: HRGMv2_0039_6_154
Type: CAZyme
Location: 143374 - 144933 (-)
Type: CAZyme
Location: 143374 - 144933 (-)
Gene ID: HRGMv2_0039_6_155
Type: pfam
Location: 144933 - 145862 (-)
Type: pfam
Location: 144933 - 145862 (-)
Gene ID: HRGMv2_0039_6_156
Type: TC
Location: 145910 - 146944 (-)
Type: TC
Location: 145910 - 146944 (-)
Gene ID: HRGMv2_0039_6_157
Type: pfam
Location: 146982 - 147830 (-)
Type: pfam
Location: 146982 - 147830 (-)
Gene ID: HRGMv2_0039_6_158
Type: pfam
Location: 147833 - 148780 (-)
Type: pfam
Location: 147833 - 148780 (-)
Gene ID: HRGMv2_0039_6_159
Type: TC
Location: 148783 - 151872 (-)
Type: TC
Location: 148783 - 151872 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.