dbCAN Logo

Cluster: HRGMv2_0039_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0039_12 HRGMv2_0039_12_15 11965 13374 + 9.B.18.1.1
CAZyme HRGMv2_0039_12 HRGMv2_0039_12_16 13374 14231 + GT2
CAZyme HRGMv2_0039_12 HRGMv2_0039_12_17 14228 15151 + GT2
pfam HRGMv2_0039_12 HRGMv2_0039_12_18 15160 16044 + NTP_transferase | NTP_transf_3
pfam HRGMv2_0039_12 HRGMv2_0039_12_19 16058 16603 + dTDP_sugar_isom
CAZyme HRGMv2_0039_12 HRGMv2_0039_12_20 16623 17588 + GT2
TC HRGMv2_0039_12 HRGMv2_0039_12_21 17600 18382 + 3.A.1.103.6
TC HRGMv2_0039_12 HRGMv2_0039_12_22 18392 19129 + 3.A.1.103.1
Gene ID: HRGMv2_0039_12_15
Type: TC
Location: 11965 - 13374 (+)
Gene ID: HRGMv2_0039_12_16
Type: CAZyme
Location: 13374 - 14231 (+)
Gene ID: HRGMv2_0039_12_17
Type: CAZyme
Location: 14228 - 15151 (+)
Gene ID: HRGMv2_0039_12_18
Type: pfam
Location: 15160 - 16044 (+)
Gene ID: HRGMv2_0039_12_19
Type: pfam
Location: 16058 - 16603 (+)
Gene ID: HRGMv2_0039_12_20
Type: CAZyme
Location: 16623 - 17588 (+)
Gene ID: HRGMv2_0039_12_21
Type: TC
Location: 17600 - 18382 (+)
Gene ID: HRGMv2_0039_12_22
Type: TC
Location: 18392 - 19129 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List