Cluster: HRGMv2_0035_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0035
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0035_4 | HRGMv2_0035_4_100 | 115712 | 117046 | + | CE11 |
| pfam | HRGMv2_0035_4 | HRGMv2_0035_4_101 | 117062 | 117871 | + | Hexapep | Hexapep | Acetyltransf_11 |
| pfam | HRGMv2_0035_4 | HRGMv2_0035_4_102 | 117876 | 118697 | + | LpxI_C | LpxI_N |
| CAZyme | HRGMv2_0035_4 | HRGMv2_0035_4_103 | 118822 | 119958 | + | GT19 |
| TC | HRGMv2_0035_4 | HRGMv2_0035_4_104 | 119955 | 121739 | + | 3.A.1.106.3 |
| CAZyme | HRGMv2_0035_4 | HRGMv2_0035_4_105 | 121794 | 124325 | + | GT30 |
Gene ID: HRGMv2_0035_4_100
Type: CAZyme
Location: 115712 - 117046 (+)
Type: CAZyme
Location: 115712 - 117046 (+)
Gene ID: HRGMv2_0035_4_101
Type: pfam
Location: 117062 - 117871 (+)
Type: pfam
Location: 117062 - 117871 (+)
Gene ID: HRGMv2_0035_4_102
Type: pfam
Location: 117876 - 118697 (+)
Type: pfam
Location: 117876 - 118697 (+)
Gene ID: HRGMv2_0035_4_103
Type: CAZyme
Location: 118822 - 119958 (+)
Type: CAZyme
Location: 118822 - 119958 (+)
Gene ID: HRGMv2_0035_4_104
Type: TC
Location: 119955 - 121739 (+)
Type: TC
Location: 119955 - 121739 (+)
Gene ID: HRGMv2_0035_4_105
Type: CAZyme
Location: 121794 - 124325 (+)
Type: CAZyme
Location: 121794 - 124325 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.