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Cluster: HRGMv2_0035_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0035_3 HRGMv2_0035_3_132 155431 157035 + 2.A.58.2.2
pfam HRGMv2_0035_3 HRGMv2_0035_3_133 157129 157674 + Lysine_decarbox | LDcluster4
CAZyme HRGMv2_0035_3 HRGMv2_0035_3_134 157916 158665 + GT2
CAZyme HRGMv2_0035_3 HRGMv2_0035_3_135 158699 159628 + GT8
pfam HRGMv2_0035_3 HRGMv2_0035_3_136 159652 160848 + Wzy_C
CAZyme HRGMv2_0035_3 HRGMv2_0035_3_137 160845 161630 + GT25
CAZyme HRGMv2_0035_3 HRGMv2_0035_3_138 161627 162694 + GT9
CAZyme HRGMv2_0035_3 HRGMv2_0035_3_139 162691 163689 + GT8
Gene ID: HRGMv2_0035_3_132
Type: TC
Location: 155431 - 157035 (+)
Gene ID: HRGMv2_0035_3_133
Type: pfam
Location: 157129 - 157674 (+)
Gene ID: HRGMv2_0035_3_134
Type: CAZyme
Location: 157916 - 158665 (+)
Gene ID: HRGMv2_0035_3_135
Type: CAZyme
Location: 158699 - 159628 (+)
Gene ID: HRGMv2_0035_3_136
Type: pfam
Location: 159652 - 160848 (+)
Gene ID: HRGMv2_0035_3_137
Type: CAZyme
Location: 160845 - 161630 (+)
Gene ID: HRGMv2_0035_3_138
Type: CAZyme
Location: 161627 - 162694 (+)
Gene ID: HRGMv2_0035_3_139
Type: CAZyme
Location: 162691 - 163689 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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