Cluster: HRGMv2_0035_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0035
- CGC Family ID: CGCFAM_04819
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0035_2 | HRGMv2_0035_2_167 | 191026 | 191763 | - | 3.A.1.5.23 |
| TC | HRGMv2_0035_2 | HRGMv2_0035_2_168 | 192319 | 193719 | - | 2.A.8.1.6 |
| pfam | HRGMv2_0035_2 | HRGMv2_0035_2_169 | 193916 | 194908 | + | WYL |
| TC | HRGMv2_0035_2 | HRGMv2_0035_2_170 | 194973 | 196391 | - | 2.A.118.1.4 |
| peptidase | HRGMv2_0035_2 | HRGMv2_0035_2_171 | 196401 | 197585 | - | M20.UPD |
| CAZyme | HRGMv2_0035_2 | HRGMv2_0035_2_172 | 198214 | 198813 | - | GH23 |
Gene ID: HRGMv2_0035_2_167
Type: TC
Location: 191026 - 191763 (-)
Type: TC
Location: 191026 - 191763 (-)
Gene ID: HRGMv2_0035_2_168
Type: TC
Location: 192319 - 193719 (-)
Type: TC
Location: 192319 - 193719 (-)
Gene ID: HRGMv2_0035_2_169
Type: pfam
Location: 193916 - 194908 (+)
Type: pfam
Location: 193916 - 194908 (+)
Gene ID: HRGMv2_0035_2_170
Type: TC
Location: 194973 - 196391 (-)
Type: TC
Location: 194973 - 196391 (-)
Gene ID: HRGMv2_0035_2_171
Type: peptidase
Location: 196401 - 197585 (-)
Type: peptidase
Location: 196401 - 197585 (-)
Gene ID: HRGMv2_0035_2_172
Type: CAZyme
Location: 198214 - 198813 (-)
Type: CAZyme
Location: 198214 - 198813 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.