Cluster: HRGMv2_0035_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0035
- CGC Family ID: CGCFAM_00005
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0035_2 | HRGMv2_0035_2_64 | 73929 | 74879 | - | GT2 |
| pfam | HRGMv2_0035_2 | HRGMv2_0035_2_65 | 75092 | 76156 | - | EpsG |
| CAZyme | HRGMv2_0035_2 | HRGMv2_0035_2_66 | 76159 | 77289 | - | GT4 |
| CAZyme | HRGMv2_0035_2 | HRGMv2_0035_2_67 | 77657 | 78445 | - | GT2 |
| TC | HRGMv2_0035_2 | HRGMv2_0035_2_68 | 78481 | 79869 | - | 9.B.18.1.3 |
| TC | HRGMv2_0035_2 | HRGMv2_0035_2_69 | 79982 | 80704 | - | 8.A.3.2.1 |
Gene ID: HRGMv2_0035_2_64
Type: CAZyme
Location: 73929 - 74879 (-)
Type: CAZyme
Location: 73929 - 74879 (-)
Gene ID: HRGMv2_0035_2_65
Type: pfam
Location: 75092 - 76156 (-)
Type: pfam
Location: 75092 - 76156 (-)
Gene ID: HRGMv2_0035_2_66
Type: CAZyme
Location: 76159 - 77289 (-)
Type: CAZyme
Location: 76159 - 77289 (-)
Gene ID: HRGMv2_0035_2_67
Type: CAZyme
Location: 77657 - 78445 (-)
Type: CAZyme
Location: 77657 - 78445 (-)
Gene ID: HRGMv2_0035_2_68
Type: TC
Location: 78481 - 79869 (-)
Type: TC
Location: 78481 - 79869 (-)
Gene ID: HRGMv2_0035_2_69
Type: TC
Location: 79982 - 80704 (-)
Type: TC
Location: 79982 - 80704 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.